PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN43750.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 371aa    MW: 42162.5 Da    PI: 5.1072
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN43750.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.5e-12166217155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ +  Lr+l+P +   + ++ + a+i   A+e++++L+
  KHN43750.1 166 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 217
                 79****************************...9*****************9995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.14E-12164221No hitNo description
Gene3DG3DSA:4.10.280.101.2E-13164220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-16165231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.428165216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9166217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-9171222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00468297361No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MPQTTPPHGF YGATSAATTS YDKLSFADVM QFADFGPKLA LNQAKNCEES AIDPVYFLKF  60
PVLNNKMEED QQNMMMNNDD PDGDEAENHH HDERFNNLVS VEDKEGMMVR EDEETTRVSD  120
DNNSVQIRFL GHEEPQQKNN CAVQENKNGK RKRPRTVKTS EEVESQRMTH IAVERNRRKQ  180
MNEHLRVLRS LMPGSYVQRG DQASIIGGAI EFVRELEQLL QCLESQKRRR LLGEAQARQV  240
GDPSLATQQQ PPFFPPLPIP NEQMKLVEME TGLHEETAES KSCLADVEVK LLGFDAMIKI  300
LSRRRPGQLI KTIAALEDLQ LIILHTNITT IEQTVLYSFN VKVASDSRFT AEDIASSVQQ  360
IFNFIHANTS M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166177RMTHIAVERNRR
2226230KRRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-159AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006573288.10.0PREDICTED: transcription factor FAMA-like
SwissprotQ56YJ81e-146FAMA_ARATH; Transcription factor FAMA
TrEMBLA0A0B2SFI80.0A0A0B2SFI8_GLYSO; Transcription factor FAMA
STRINGGLYMA01G23230.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104893340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.11e-130bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]